optbdmaeAT: Optimal Block Designs for Two-Colour cDNA Microarray Experiments
Computes A-, MV-, D- and E-optimal or near-optimal block designs for two-colour cDNA microarray experiments using the linear fixed effects and mixed effects models where the interest is in a comparison of all possible elementary treatment contrasts. The algorithms used in this package are based on the treatment exchange and array exchange algorithms of Debusho, Gemechu and Haines (2018) <doi:10.1080/03610918.2018.1429617>. The package also provides an optional method of using the graphical user interface (GUI) R package tcltk to ensure that it is user friendly.
Version: |
1.0.2 |
Depends: |
R (≥ 3.3.1), MASS, Matrix, igraph, tcltk |
Published: |
2025-05-24 |
Author: |
Dibaba Bayisa Gemechu [aut, cre],
Legesse Kassa Debusho [aut],
Linda Haines [aut] |
Maintainer: |
Dibaba Bayisa Gemechu <diboobayu at gmail.com> |
License: |
GPL-2 |
NeedsCompilation: |
no |
In views: |
ExperimentalDesign |
CRAN checks: |
optbdmaeAT results |
Documentation:
Downloads:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=optbdmaeAT
to link to this page.