KnockoffHybrid: Hybrid Analysis of Population and Trio Data with Knockoff Statistics for FDR Control

Identification of putative causal variants in genome-wide association studies using hybrid analysis of both the trio and population designs. The package implements the method in the paper: Yang, Y., Wang, Q., Wang, C., Buxbaum, J., & Ionita-Laza, I. (2024). KnockoffHybrid: A knockoff framework for hybrid analysis of trio and population designs in genome-wide association studies. The American Journal of Human Genetics, in press.

Version:	1.0.1
Depends:	R (≥ 2.10)
Imports:	glmnet, SPAtest
Published:	2024-06-11
Author:	Yi Yang [aut, cre]
Maintainer:	Yi Yang <yi.yang at cityu.edu.hk>
License:	GPL-3
NeedsCompilation:	no
Materials:	README
CRAN checks:	KnockoffHybrid results

Documentation:

Reference manual:

KnockoffHybrid.html , KnockoffHybrid.pdf

Downloads:

Package source:	KnockoffHybrid_1.0.1.tar.gz
Windows binaries:	r-devel: KnockoffHybrid_1.0.1.zip, r-release: KnockoffHybrid_1.0.1.zip, r-oldrel: KnockoffHybrid_1.0.1.zip
macOS binaries:	r-release (arm64): KnockoffHybrid_1.0.1.tgz, r-oldrel (arm64): KnockoffHybrid_1.0.1.tgz, r-release (x86_64): KnockoffHybrid_1.0.1.tgz, r-oldrel (x86_64): KnockoffHybrid_1.0.1.tgz
Old sources:	KnockoffHybrid archive

Linking:

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