Last updated on 2025-07-18 08:51:04 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.82 | 256.19 | 269.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.74 | 254.08 | 264.82 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.61 | 277.85 | 291.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 170.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 182.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 164.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/122s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.458, system: 0.045, elapsed: 1.659 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.035, system: 0.128, elapsed: 12.056 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.754, system: 0.193, elapsed: 5.465 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.230 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.134, system: 0.406, elapsed: 20.392 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.499, system: 0.043, elapsed: 1.946 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.994, system: 0.088, elapsed: 12.502 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.014, elapsed: 0.369 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.700, system: 0.159, elapsed: 5.974 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.276 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.086, system: 0.326, elapsed: 21.981 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.550, system: 0.031, elapsed: 4.278 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.959, system: 0.065, elapsed: 23.447 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.490 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.672, system: 0.177, elapsed: 6.960 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.302 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.140, system: 0.210, elapsed: 1.268 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.295, system: 0.517, elapsed: 38.029 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.450, system: 0.027, elapsed: 2.573 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.942, system: 0.057, elapsed: 12.556 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.552, system: 0.169, elapsed: 4.688 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.248 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.265, system: 0.456, elapsed: 13.673 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.227, system: 0.755, elapsed: 35.220 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/113s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.490, system: 0.036, elapsed: 1.580 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.028, system: 0.146, elapsed: 11.631 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.014, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.603, system: 0.203, elapsed: 4.818 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.005, elapsed: 0.195 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.990, system: 0.430, elapsed: 19.156 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.518, system: 0.033, elapsed: 1.656 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.964, system: 0.076, elapsed: 10.796 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.676, system: 0.162, elapsed: 8.552 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.009, elapsed: 0.460 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.055, system: 0.318, elapsed: 22.632 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.498, system: 0.030, elapsed: 3.510 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.993, system: 0.053, elapsed: 20.336 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.356 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.542, system: 0.158, elapsed: 5.217 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.264 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.066, system: 0.216, elapsed: 0.944 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.087, system: 0.506, elapsed: 31.948 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.470, system: 0.028, elapsed: 1.833 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.939, system: 0.061, elapsed: 12.090 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.231 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.506, system: 0.153, elapsed: 5.135 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.003, elapsed: 0.191 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.969, system: 0.427, elapsed: 13.602 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.869, system: 0.709, elapsed: 33.947 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64