Last updated on 2025-10-26 18:50:16 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.13 | 252.16 | 265.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.09 | 267.58 | 277.67 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 58.00 | 285.70 | 343.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.00 | 274.06 | 289.06 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.93 | 258.75 | 273.68 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 22.00 | 371.00 | 393.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 194.00 | 214.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 16.00 | 371.00 | 387.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 239.00 | 263.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [93s/292s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.825, system: 0.148, elapsed: 5.719 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.626, system: 0.480, elapsed: 27.625 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.032, elapsed: 0.588 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.232, system: 0.480, elapsed: 18.049 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.013, elapsed: 0.874 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.759, system: 1.604, elapsed: 55.957 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.768, system: 0.112, elapsed: 5.577 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.747, system: 0.544, elapsed: 29.747 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.042, elapsed: 0.916 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.479, system: 0.589, elapsed: 15.453 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.023, elapsed: 0.899 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.066, system: 1.779, elapsed: 56.697 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.986, system: 0.172, elapsed: 4.643 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.679, system: 0.466, elapsed: 48.639 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.031, elapsed: 0.761 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.262, system: 0.482, elapsed: 18.737 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.014, elapsed: 0.858 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.326, system: 0.367, elapsed: 3.639 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.430, system: 1.935, elapsed: 81.246 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.584, system: 0.073, elapsed: 4.875 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.558, system: 0.301, elapsed: 27.879 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.037, elapsed: 0.573 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.135, system: 0.402, elapsed: 11.908 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.007, elapsed: 0.287 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.104, system: 0.894, elapsed: 29.721 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.551, system: 2.123, elapsed: 78.098 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [93s/274s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.737, system: 0.111, elapsed: 5.393 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.859, system: 0.628, elapsed: 26.171 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.040, elapsed: 0.451 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.158, system: 0.469, elapsed: 11.524 seconds]
Computing values for grid cells...
... done. [user: 0.206, system: 0.027, elapsed: 0.936 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.836, system: 1.639, elapsed: 47.838 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.879, system: 0.140, elapsed: 7.048 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.690, system: 0.484, elapsed: 28.546 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.045, elapsed: 0.656 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.240, system: 0.472, elapsed: 18.643 seconds]
Computing values for grid cells...
... done. [user: 0.198, system: 0.023, elapsed: 0.625 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.896, system: 1.530, elapsed: 59.412 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.907, system: 0.151, elapsed: 5.706 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.547, system: 0.424, elapsed: 29.191 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.034, elapsed: 0.578 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.064, system: 0.449, elapsed: 16.327 seconds]
Computing values for grid cells...
... done. [user: 0.206, system: 0.040, elapsed: 0.851 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 3 4
... computing probabilities from permuted values ...
... done. [user: 1.221, system: 0.400, elapsed: 3.278 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.956, system: 2.029, elapsed: 60.032 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.690, system: 0.074, elapsed: 3.904 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.409, system: 0.313, elapsed: 27.390 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.030, elapsed: 0.522 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.018, system: 0.404, elapsed: 12.067 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.024, elapsed: 0.651 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.221, system: 1.238, elapsed: 41.748 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.535, system: 2.459, elapsed: 89.305 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64