Last updated on 2025-09-24 20:48:38 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.43 | 241.06 | 253.49 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.89 | 228.59 | 238.48 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 355.03 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.58 | 299.55 | 314.13 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.63 | 254.74 | 270.37 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 209.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 205.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 242.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/151s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.525, system: 0.052, elapsed: 2.579 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.916, system: 0.124, elapsed: 12.480 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.016, elapsed: 0.290 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.751, system: 0.235, elapsed: 5.335 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.005, elapsed: 0.222 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.077, system: 0.460, elapsed: 21.694 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.620, system: 0.067, elapsed: 3.314 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.087, system: 0.262, elapsed: 17.879 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.017, elapsed: 0.546 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.770, system: 0.232, elapsed: 9.965 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.007, elapsed: 0.334 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.357, system: 0.610, elapsed: 33.075 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.777, system: 0.090, elapsed: 3.587 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.031, system: 0.223, elapsed: 17.409 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.015, elapsed: 0.449 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.824, system: 0.248, elapsed: 7.547 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.004, elapsed: 0.269 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.116, system: 0.221, elapsed: 1.326 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.731, system: 0.835, elapsed: 31.785 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.469, system: 0.035, elapsed: 2.678 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.964, system: 0.107, elapsed: 18.445 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.015, elapsed: 0.439 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.661, system: 0.196, elapsed: 8.127 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.299 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.341, system: 0.634, elapsed: 25.328 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.438, system: 1.023, elapsed: 56.606 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/143s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.509, system: 0.060, elapsed: 1.992 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.967, system: 0.168, elapsed: 13.375 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.018, elapsed: 0.390 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.607, system: 0.250, elapsed: 7.177 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.008, elapsed: 0.430 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.952, system: 0.529, elapsed: 24.310 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.670, system: 0.075, elapsed: 3.503 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.170, system: 0.279, elapsed: 18.111 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.019, elapsed: 0.298 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.695, system: 0.275, elapsed: 6.117 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.007, elapsed: 0.365 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.416, system: 0.692, elapsed: 29.450 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.632, system: 0.067, elapsed: 2.779 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.003, system: 0.160, elapsed: 16.468 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.011, elapsed: 0.291 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.522, system: 0.227, elapsed: 6.026 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.016, elapsed: 0.245 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.041, system: 0.275, elapsed: 1.315 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.192, system: 0.796, elapsed: 28.146 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.624, system: 0.071, elapsed: 3.175 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.147, system: 0.290, elapsed: 18.070 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.366 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.605, system: 0.196, elapsed: 11.015 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.009, elapsed: 0.400 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.940, system: 0.495, elapsed: 18.450 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.312, system: 1.108, elapsed: 52.949 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64