Last updated on 2025-12-25 19:50:18 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.5.4 | 33.97 | 181.69 | 215.66 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.5.4 | 23.17 | 102.28 | 125.45 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.5.4 | 63.00 | 277.85 | 340.85 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.5.4 | 60.00 | 284.38 | 344.38 | OK | |
| r-devel-windows-x86_64 | 0.5.4 | 40.00 | 206.00 | 246.00 | OK | |
| r-patched-linux-x86_64 | 0.5.4 | 32.73 | 165.76 | 198.49 | OK | |
| r-release-linux-x86_64 | 0.5.4 | 33.07 | 165.12 | 198.19 | OK | |
| r-release-macos-arm64 | 0.5.4 | 7.00 | 49.00 | 56.00 | OK | |
| r-release-macos-x86_64 | 0.5.4 | 23.00 | 186.00 | 209.00 | OK | |
| r-release-windows-x86_64 | 0.5.4 | 39.00 | 202.00 | 241.00 | OK | |
| r-oldrel-macos-arm64 | 0.5.4 | 7.00 | 55.00 | 62.00 | OK | |
| r-oldrel-macos-x86_64 | 0.5.4 | 24.00 | 197.00 | 221.00 | OK | |
| r-oldrel-windows-x86_64 | 0.5.4 | 49.00 | 264.00 | 313.00 | OK |
Version: 0.5.4
Check: examples
Result: ERROR
Running examples in ‘lime-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: explain
> ### Title: Explain model predictions
> ### Aliases: explain explain.data.frame explain.character explain.imagefile
>
> ### ** Examples
>
> # Explaining a model and an explainer for it
> library(MASS)
> iris_test <- iris[1, 1:4]
> iris_train <- iris[-1, 1:4]
> iris_lab <- iris[[5]][-1]
> model <- lda(iris_train, iris_lab)
> explanation <- lime(iris_train, model)
>
> # This can now be used together with the explain method
> explain(iris_test, explanation, n_labels = 1, n_features = 2)
Error in xtfrm.data.frame(list(setosa = 1, versicolor = 5.19132078849213e-22, :
cannot xtfrm data frames
Calls: explain ... explain.data.frame -> lapply -> FUN -> xtfrm -> xtfrm.data.frame
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.5.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [23s/27s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(lime)
>
> test_check("lime")
Saving _problems/test-data.frame-21.R
[ FAIL 1 | WARN 0 | SKIP 1 | PASS 21 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-h2o.R:1:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-data.frame.R:15:3'): lime explanation only produces one entry per case and feature ──
Error in `xtfrm.data.frame(structure(list(setosa = 1, versicolor = 3.89635792768651e-22, virginica = 2.61116827494801e-42), row.names = 1L, class = "data.frame"))`: cannot xtfrm data frames
Backtrace:
▆
1. ├─lime::explain(...) at test-data.frame.R:15:3
2. └─lime:::explain.data.frame(...)
3. └─base::lapply(...)
4. └─lime (local) FUN(X[[i]], ...)
5. ├─base::xtfrm(`<data.frame>`)
6. └─base::xtfrm.data.frame(`<data.frame>`)
[ FAIL 1 | WARN 0 | SKIP 1 | PASS 21 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.5.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘Understanding_lime.Rmd’ using rmarkdown
Quitting from Understanding_lime.Rmd:161-176 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `xtfrm.data.frame()`:
! cannot xtfrm data frames
---
Backtrace:
▆
1. ├─lime::explain(biopsy[test_set, ], explainer, n_labels = 1, n_features = 4)
2. └─lime:::explain.data.frame(...)
3. └─base::lapply(...)
4. └─lime (local) FUN(X[[i]], ...)
5. ├─base::xtfrm(`<data.frame>`)
6. └─base::xtfrm.data.frame(`<data.frame>`)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Understanding_lime.Rmd' failed with diagnostics:
cannot xtfrm data frames
--- failed re-building ‘Understanding_lime.Rmd’
SUMMARY: processing the following file failed:
‘Understanding_lime.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc