Last updated on 2025-12-25 19:50:22 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 2.02 | 88.01 | 90.03 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 1.80 | 51.41 | 53.21 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 161.20 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 168.97 | OK | |||
| r-devel-windows-x86_64 | 1.0.0 | 4.00 | 341.00 | 345.00 | OK | |
| r-patched-linux-x86_64 | 1.0.0 | 2.74 | 82.31 | 85.05 | OK | |
| r-release-linux-x86_64 | 1.0.0 | 1.87 | 82.07 | 83.94 | OK | |
| r-release-macos-arm64 | 1.0.0 | OK | ||||
| r-release-macos-x86_64 | 1.0.0 | 2.00 | 173.00 | 175.00 | OK | |
| r-release-windows-x86_64 | 1.0.0 | 4.00 | 335.00 | 339.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.0 | OK | ||||
| r-oldrel-macos-x86_64 | 1.0.0 | 2.00 | 190.00 | 192.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0.0 | 5.00 | 486.00 | 491.00 | OK |
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in ‘OutSeekR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: calculate.p.values
> ### Title: Calculate p-values
> ### Aliases: calculate.p.values
>
> ### ** Examples
>
> data(example.data.for.calculate.p.values);
> i <- 1; # row index of transcript to test
> calculate.p.values(
+ x = example.data.for.calculate.p.values$data[i,],
+ x.distribution = example.data.for.calculate.p.values$x.distribution[i],
+ x.zrange.mean = example.data.for.calculate.p.values$x.zrange.mean[i],
+ x.zrange.median = example.data.for.calculate.p.values$x.zrange.median[i],
+ x.zrange.trimmean = example.data.for.calculate.p.values$x.zrange.trimmean[i],
+ x.fraction.kmeans = example.data.for.calculate.p.values$x.fraction.kmeans[i],
+ x.cosine.similarity = example.data.for.calculate.p.values$x.cosine.similarity[i],
+ null.zrange.mean = example.data.for.calculate.p.values$null.zrange.mean,
+ null.zrange.median = example.data.for.calculate.p.values$null.zrange.median,
+ null.zrange.trimmean = example.data.for.calculate.p.values$null.zrange.trimmean,
+ null.fraction.kmeans = example.data.for.calculate.p.values$null.fraction.kmeans,
+ null.cosine.similarity = example.data.for.calculate.p.values$null.cosine.similarity,
+ kmeans.nstart = example.data.for.calculate.p.values$kmeans.nstart
+ );
Error in xtfrm.data.frame(list(S01 = 4.66463722885575, S02 = 1.47026470253429, :
cannot xtfrm data frames
Calls: calculate.p.values -> xtfrm -> xtfrm.data.frame
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc