Last updated on 2025-12-25 19:50:08 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.4 | 14.07 | 160.44 | 174.51 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.2.4 | 7.93 | 103.57 | 111.50 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.2.4 | 24.00 | 253.53 | 277.53 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.2.4 | 23.00 | 260.10 | 283.10 | OK | |
| r-devel-windows-x86_64 | 1.2.4 | 18.00 | 216.00 | 234.00 | OK | |
| r-patched-linux-x86_64 | 1.2.4 | 15.92 | 148.50 | 164.42 | OK | |
| r-release-linux-x86_64 | 1.2.4 | 13.36 | 147.09 | 160.45 | OK | |
| r-release-macos-arm64 | 1.2.4 | OK | ||||
| r-release-macos-x86_64 | 1.2.4 | 10.00 | 222.00 | 232.00 | OK | |
| r-release-windows-x86_64 | 1.2.4 | 19.00 | 153.00 | 172.00 | OK | |
| r-oldrel-macos-arm64 | 1.2.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.2.4 | 10.00 | 173.00 | 183.00 | OK | |
| r-oldrel-windows-x86_64 | 1.2.4 | 25.00 | 208.00 | 233.00 | ERROR |
Version: 1.2.4
Check: examples
Result: ERROR
Running examples in 'BioMonTools-Ex.R' failed
The error most likely occurred in:
> ### Name: qc_taxa
> ### Title: Quality Control Check on User Data Against Master Taxa List
> ### Aliases: qc_taxa
>
> ### ** Examples
>
> # Example 1, Master Taxa List, Bugs
> url_mt_bugs <- "https://github.com/leppott/MBSStools_SupportFiles/raw/master/Data/CHAR_Bugs.csv"
> df_mt_bugs <- read.csv(url_mt_bugs)
>
> # User data
> DF_User <- data_benthos_MBSS
> DF_Official <- NULL # NULL df_mt_bugs
> fun.Community <- "bugs"
> useOfficialTaxaInfo <- "only_Official"
> # modify taxa id column
> DF_User[, "TAXON"] <- DF_User[, "TAXAID"]
>
> df_qc_taxa_bugs <- qc_taxa(DF_User,
+ DF_Official,
+ fun.Community,
+ useOfficialTaxaInfo)
Warning in file(file, "rt") :
URL 'https://github.com/leppott/MBSStools_SupportFiles/raw/master/Data/CHAR_Bugs.csv': status was 'Server returned nothing (no headers, no data)'
Error in file(file, "rt") :
cannot open the connection to 'https://github.com/leppott/MBSStools_SupportFiles/raw/master/Data/CHAR_Bugs.csv'
Calls: qc_taxa -> <Anonymous> -> read.table -> file
Execution halted
Flavor: r-oldrel-windows-x86_64