Package: rCNV
Type: Package
Title: Detect Copy Number Variants from SNPs Data
Version: 1.3.0
Date: 2024-09-20
Language: en-US
Authors@R: c(person(given="Piyal",family="Karunarathne", email="piyalkarumail@yahoo.com", role = c("aut", "cre"),comment = c(ORCID = "0000-0002-1934-145X")),person(given="Qiujie",family="Zhou", email="qiujie.zhou@ebc.uu.se", role = c("aut"),comment = c(ORCID = "0000-0001-7351-2371")),person("Klaus", "Schliep", email="klaus.schliep@gmail.com", role = c("aut"), comment = c(ORCID = "0000-0003-2941-0161")),person(given="Pascal", family="Milesi", role = "aut",comment = c(ORCID = "0000-0001-8580-4291")))
Maintainer: Piyal Karunarathne <piyalkarumail@yahoo.com>
Description: Functions in this package will import filtered variant call format (VCF) files of SNPs data and generate data sets to detect copy number variants, visualize them and do downstream analyses with copy number variants(e.g. Environmental association analyses).
License: AGPL (>= 3)
Imports: data.table, graphics, colorspace, R.utils, qgraph, stringr
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
Depends: R (>= 3.6.0)
Suggests: rmarkdown, knitr, testthat (>= 3.0.0), covr
Config/testthat/edition: 3
URL: https://piyalkarum.github.io/rCNV/,
        https://cran.r-project.org/package=rCNV
BugReports: https://github.com/piyalkarum/rCNV/issues
Packaged: 2024-09-20 12:14:33 UTC; piyalkaru
NeedsCompilation: no
Author: Piyal Karunarathne [aut, cre] (<https://orcid.org/0000-0002-1934-145X>),
  Qiujie Zhou [aut] (<https://orcid.org/0000-0001-7351-2371>),
  Klaus Schliep [aut] (<https://orcid.org/0000-0003-2941-0161>),
  Pascal Milesi [aut] (<https://orcid.org/0000-0001-8580-4291>)
Repository: CRAN
Date/Publication: 2024-09-20 12:40:02 UTC
Built: R 4.5.2; ; 2025-12-23 05:12:04 UTC; windows
