Package: glinvci
Type: Package
Title: Phylogenetic Comparative Methods with Uncertainty Estimates
Version: 1.2.4
Date: 2024-04-16
Authors@R: c(person(family="Kiang", given="Woodrow", role=c("cre","aut"), email="hello@hckiang.com"))
Maintainer: Woodrow Kiang <hello@hckiang.com>
Description: A framework for analytically computing the asymptotic confidence intervals and maximum-likelihood estimates of a class of continuous-time Gaussian branching processes defined by Mitov V, Bartoszek K, Asimomitis G, Stadler T (2019) <doi:10.1016/j.tpb.2019.11.005>. The class of model includes the widely used Ornstein-Uhlenbeck and Brownian motion branching processes. The framework is designed to be flexible enough so that the users can easily specify their own sub-models, or re-parameterizations, and obtain the maximum-likelihood estimates and confidence intervals of their own custom models.
License: GPL-3
RoxygenNote: 7.2.2
VignetteBuilder: utils
Encoding: UTF-8
URL: https://git.sr.ht/~hckiang/glinvci,
        https://github.com/hckiang/glinvci
Depends: R (>= 3.3.0)
Imports: optimx, lbfgsb3c, BB, ape, numDeriv, plyr, rlang, generics,
        utils, stats
Suggests: testthat
NeedsCompilation: yes
Packaged: 2024-04-16 22:11:39 UTC; hckiang
Author: Woodrow Kiang [cre, aut]
Repository: CRAN
Date/Publication: 2024-04-18 10:32:44 UTC
Built: R 4.5.2; x86_64-w64-mingw32; 2025-12-25 02:56:30 UTC; windows
Archs: x64
