* using log directory 'd:/Rcompile/CRANpkg/local/4.6/LWFBrook90R.Rcheck'
* using R Under development (unstable) (2025-12-23 r89222 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'LWFBrook90R/DESCRIPTION' ... OK
* this is package 'LWFBrook90R' version '0.6.3'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'LWFBrook90R' can be installed ... OK
* used C compiler: 'gcc.exe (GCC) 14.3.0'
* used Fortran compiler: 'GNU Fortran (GCC) 14.3.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s] OK
* checking whether the package can be unloaded cleanly ... [0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s] OK
* checking whether the namespace can be unloaded cleanly ... [1s] OK
* checking loading without being on the library search path ... [0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [5s] OK
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compiled code ... OK
* checking usage of KIND in Fortran files ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [4s] ERROR
Running examples in 'LWFBrook90R-Ex.R' failed
The error most likely occurred in:

> ### Name: process_outputs_LWFB90
> ### Title: Aggregate and group model outputs similar to ancient LWFB90
> ###   textfile outputs (.ASC-files)
> ### Aliases: process_outputs_LWFB90
> 
> ### ** Examples
> 
> data("slb1_soil")
> data("slb1_meteo")
> opts <- set_optionsLWFB90(startdate = as.Date("2002-06-01"), enddate = as.Date("2002-06-05"))
> parms <- set_paramLWFB90()
> soil <- cbind(slb1_soil, hydpar_wessolek_tab(texture = slb1_soil$texture))
> 
> outsel <- set_outputLWFB90()
> outsel[,] <- 1L
> 
> res <- run_LWFB90(options_b90 = opts,
+            param_b90 = parms,
+            climate = slb1_meteo,
+            soil = soil)
Error in `[.data.table`(soil_dt, , `:=`(mat, .GRP), by = list(ths, thr,  : 
  attempt access index 17/17 in VECTOR_ELT
Calls: run_LWFB90 -> soil_to_param -> [ -> [.data.table
Execution halted
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [9s] ERROR
  Running 'testthat.R' [9s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(LWFBrook90R)
  > 
  > test_check("LWFBrook90R")
  Saving _problems/test-multirun-13.R
  Saving _problems/test-options-18.R
  Saving _problems/test-runLWFB90-17.R
  Saving _problems/test-runLWFB90_errors-26.R
  [ FAIL 4 | WARN 0 | SKIP 1 | PASS 9 ]
  
  ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
  • Will fail as long as the source codes differ slightly?! (1):
    'test-output_vs_b90exe.R:1:1'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-multirun.R:13:1'): (code run outside of `test_that()`) ─────────
  Error in ``[.data.table`(soil_dt, , `:=`(mat, .GRP), by = list(ths, thr, alpha, npar, ksat, tort, gravel))`: attempt access index 17/17 in VECTOR_ELT
  Backtrace:
      ▆
   1. └─LWFBrook90R::soil_to_param(soil) at test-multirun.R:13:1
   2.   ├─...[]
   3.   └─data.table:::`[.data.table`(...)
  ── Error ('test-options.R:15:3'): Precipitation correction works ───────────────
  Error in ``[.data.table`(soil_dt, , `:=`(mat, .GRP), by = list(ths, thr, alpha, npar, ksat, tort, gravel))`: attempt access index 17/17 in VECTOR_ELT
  Backtrace:
      ▆
   1. └─LWFBrook90R::run_LWFB90(...) at test-options.R:15:3
   2.   └─LWFBrook90R::soil_to_param(soil, options_b90$imodel)
   3.     ├─...[]
   4.     └─data.table:::`[.data.table`(...)
  ── Error ('test-runLWFB90.R:14:1'): (code run outside of `test_that()`) ────────
  Error in ``[.data.table`(soil_dt, , `:=`(mat, .GRP), by = list(ths, thr, alpha, npar, ksat, tort, gravel))`: attempt access index 17/17 in VECTOR_ELT
  Backtrace:
      ▆
   1. └─LWFBrook90R::run_LWFB90(...) at test-runLWFB90.R:14:1
   2.   └─LWFBrook90R::soil_to_param(soil, options_b90$imodel)
   3.     ├─...[]
   4.     └─data.table:::`[.data.table`(...)
  ── Error ('test-runLWFB90_errors.R:26:1'): (code run outside of `test_that()`) ──
  Error in ``[.data.table`(soil_dt, , `:=`(mat, .GRP), by = list(ths, thr, alpha, npar, ksat, tort, gravel))`: attempt access index 17/17 in VECTOR_ELT
  Backtrace:
      ▆
   1. └─LWFBrook90R::soil_to_param(soil_bad) at test-runLWFB90_errors.R:26:1
   2.   ├─...[]
   3.   └─data.table:::`[.data.table`(...)
  
  [ FAIL 4 | WARN 0 | SKIP 1 | PASS 9 ]
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [15s] ERROR
Error(s) in re-building vignettes:
--- re-building 'LWFBook90R-1-Intro.Rmd' using rmarkdown
--- finished re-building 'LWFBook90R-1-Intro.Rmd'

--- re-building 'LWFBrook90R-2-Options_Param.Rmd' using rmarkdown

Quitting from LWFBrook90R-2-Options_Param.Rmd:301-325 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 17/17 in VECTOR_ELT
---
Backtrace:
    ▆
 1. └─LWFBrook90R::run_LWFB90(...)
 2.   └─LWFBrook90R::soil_to_param(soil, options_b90$imodel)
 3.     ├─...[]
 4.     └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'LWFBrook90R-2-Options_Param.Rmd' failed with diagnostics:
attempt access index 17/17 in VECTOR_ELT
--- failed re-building 'LWFBrook90R-2-Options_Param.Rmd'

--- re-building 'LWFBrook90R-3-Multiruns.Rmd' using rmarkdown
--- finished re-building 'LWFBrook90R-3-Multiruns.Rmd'

--- re-building 'LWFBrook90R-4-Multisite-Runs.Rmd' using rmarkdown

Quitting from LWFBrook90R-4-Multisite-Runs.Rmd:109-117 [unnamed-chunk-8]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 17/17 in VECTOR_ELT
---
Backtrace:
    ▆
 1. └─LWFBrook90R::run_LWFB90(...)
 2.   └─LWFBrook90R::soil_to_param(soil, options_b90$imodel)
 3.     ├─...[]
 4.     └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'LWFBrook90R-4-Multisite-Runs.Rmd' failed with diagnostics:
attempt access index 17/17 in VECTOR_ELT
--- failed re-building 'LWFBrook90R-4-Multisite-Runs.Rmd'

SUMMARY: processing the following files failed:
  'LWFBrook90R-2-Options_Param.Rmd' 'LWFBrook90R-4-Multisite-Runs.Rmd'

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [20s] OK
* checking HTML version of manual ... [9s] OK
* DONE
Status: 3 ERRORs