CRAN Package Check Results for Package circular

Last updated on 2015-06-29 08:47:50.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4-7 2.50 41.82 44.32 NOTE
r-devel-linux-x86_64-debian-gcc 0.4-7 2.54 40.20 42.74 NOTE
r-devel-linux-x86_64-fedora-clang 0.4-7 77.72 NOTE
r-devel-linux-x86_64-fedora-gcc 0.4-7 80.56 NOTE
r-devel-osx-x86_64-clang 0.4-7 72.35 NOTE
r-devel-windows-ix86+x86_64 0.4-7 26.00 111.00 137.00 NOTE
r-patched-linux-x86_64 0.4-7 2.64 39.15 41.80 NOTE
r-patched-solaris-sparc 0.4-7 497.40 NOTE
r-patched-solaris-x86 0.4-7 96.20 NOTE
r-release-linux-x86_64 0.4-7 2.64 39.10 41.74 NOTE
r-release-osx-x86_64-mavericks 0.4-7 NOTE
r-release-windows-ix86+x86_64 0.4-7 28.00 115.00 143.00 NOTE
r-oldrel-windows-ix86+x86_64 0.4-7 30.00 82.00 112.00 NOTE

Check Details

Version: 0.4-7
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     as.data.frame.circular lines.edf modal.region.circular
     modal.region.default plot.edf plot.function.circular
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.4-7
Check: foreign function calls
Result: NOTE
    Call with DUP:
     .C("R_distance", x = as.double(x), nr = N, nc = ncol(x), d = double(N *
     (N - 1)/2), diag = as.integer(FALSE), method = as.integer(method),
     DUP = FALSE, NAOK = TRUE, PACKAGE = "circular")
    DUP is no longer supported and will be ignored.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.4-7
Check: R code for possible problems
Result: NOTE
    AovCircularRad: no visible global function definition for ‘pf’
    AovCircularRad: no visible global function definition for ‘pchisq’
    AxisCircularRad: no visible global function definition for
     ‘lines.default’
    AxisCircularRad: no visible global function definition for
     ‘text.default’
    AxisCircularRad: no visible global function definition for ‘text’
    Calpha : I2n : temp: no visible global function definition for
     ‘integrate’
    Calpha : I3n : temp: no visible global function definition for
     ‘integrate’
    Calpha : lhs : temp: no visible global function definition for
     ‘integrate’
    Calpha : temp: no visible global function definition for ‘uniroot’
    Calphaapprox : temp: no visible global function definition for ‘qchisq’
    Calphaapprox : temp: no visible global function definition for ‘qf’
    CirclePlotRad: no visible global function definition for ‘par’
    CirclePlotRad: no visible global function definition for ‘plot.default’
    ClmLocationCircularRad: no visible global function definition for
     ‘lm.wfit’
    ClmLocationCircularStartRad : beta.init: no visible global function
     definition for ‘lm’
    ClmLocationCircularStartRad: no visible global function definition for
     ‘optim’
    CorCircularRad: no visible global function definition for ‘pnorm’
    DgenvonmisesRad: no visible global function definition for ‘integrate’
    DjonespewseyRad: no visible global function definition for ‘integrate’
    EqualKappaTestRad: no visible global function definition for ‘pchisq’
    LinesCircularRad: no visible global function definition for
     ‘lines.default’
    LmCircularccRad: no visible global function definition for ‘lm’
    LmCircularccRad: no visible global function definition for ‘pchisq’
    LmCircularclRad: no visible global function definition for ‘lm’
    LmCircularclRad: no visible global function definition for ‘pnorm’
    LsfitCircleRad: no visible global function definition for ‘optim’
    MlewrappedcauchyRad: no visible global function definition for
     ‘uniroot’
    PointsCircularRad: no visible global function definition for
     ‘points.default’
    PointsCircularRad: no visible global function definition for
     ‘hist.default’
    Ralpha : I2n : temp: no visible global function definition for
     ‘integrate’
    Ralpha : I3n : temp: no visible global function definition for
     ‘integrate’
    Ralpha : lhs : temp: no visible global function definition for
     ‘integrate’
    Ralpha : temp: no visible global function definition for ‘uniroot’
    Ralphaapprox : temp: no visible global function definition for ‘qchisq’
    Ralphaapprox : temp: no visible global function definition for ‘qf’
    RaoTestRad: no visible global function definition for ‘pchisq’
    RayleighTestRad: no visible global function definition for ‘pnorm’
    RayleighTestRad: no visible global function definition for ‘dnorm’
    RosediagOSRad: no visible global function definition for ‘hist.default’
    RosediagOSRad: no visible global function definition for
     ‘lines.default’
    RosediagRad: no visible global function definition for ‘hist.default’
    RosediagRad: no visible global function definition for ‘polygon’
    RwrappedcauchyRad: no visible global function definition for ‘rcauchy’
    RwrappednormalRad: no visible global function definition for ‘rnorm’
    TicksCircularRad: no visible global function definition for
     ‘lines.default’
    WallraffTestRad: no visible global function definition for
     ‘kruskal.test’
    WatsonWheelerTestRad: no visible global function definition for
     ‘pchisq’
    WatsonWilliamsTestRad: no visible global function definition for ‘pf’
    allcrosses: no visible global function definition for ‘approxfun’
    aov.circular: no visible global function definition for
     ‘complete.cases’
    area: no visible global function definition for ‘approxfun’
    area : int: no visible global function definition for ‘integrate’
    arrows.circular: no visible global function definition for ‘arrows’
    axis.circular: no visible global function definition for ‘par’
    axis.circular: no visible global function definition for ‘na.omit’
    bw.cv.ml.circular: no visible global function definition for ‘optimize’
    bw.cv.mse.circular : mse.internal: no visible global function
     definition for ‘integrate’
    bw.cv.mse.circular: no visible global function definition for
     ‘optimize’
    bw.nrd.circular: no visible global function definition for ‘uniroot’
    circle.control: no visible global function definition for ‘par’
    circular.colors: no visible global function definition for ‘hsv’
    clm: no visible global function definition for ‘is.empty.model’
    clm: no visible global function definition for ‘model.response’
    clm: no visible global function definition for ‘model.matrix’
    clm: no visible global function definition for ‘model.weights’
    clm: no visible global function definition for ‘model.offset’
    clm: no visible global function definition for ‘model.extract’
    clm: no visible global function definition for ‘.getXlevels’
    cor.circular: no visible global function definition for
     ‘complete.cases’
    cross: no visible global function definition for ‘approxfun’
    cross: no visible global function definition for ‘uniroot’
    equal.kappa.test: no visible global function definition for
     ‘complete.cases’
    formula.clm: no visible global function definition for ‘formula’
    heatmap.circular: no visible binding for global variable ‘hclust’
    heatmap.circular : <anonymous>: no visible global function definition
     for ‘reorder’
    heatmap.circular: no visible global function definition for
     ‘as.dendrogram’
    heatmap.circular: no visible global function definition for
     ‘order.dendrogram’
    heatmap.circular: no visible global function definition for ‘par’
    heatmap.circular: no visible global function definition for ‘layout’
    heatmap.circular: no visible global function definition for ‘image’
    heatmap.circular: no visible global function definition for ‘mtext’
    heatmap.circular: no visible global function definition for ‘plot’
    heatmap.circular: no visible global function definition for ‘frame’
    heatmap.circular: no visible global function definition for ‘title’
    kuiper.test: no visible global function definition for ‘na.omit’
    lines.circular: no visible global function definition for
     ‘complete.cases’
    lines.density.circular: no visible global function definition for
     ‘lines.default’
    lines.density.circular: no visible global function definition for
     ‘abline’
    lines.density.circular: no visible global function definition for
     ‘points.default’
    lines.edf: no visible global function definition for ‘lines.default’
    lines.modal.region.circular: no visible global function definition for
     ‘par’
    lines.modal.region.circular: no visible global function definition for
     ‘lines’
    lines.modal.region.circular: no visible global function definition for
     ‘abline’
    lines.modal.region.circular: no visible global function definition for
     ‘polygon’
    lm.circular.cc: no visible global function definition for
     ‘complete.cases’
    lm.circular.cl: no visible global function definition for
     ‘complete.cases’
    lsfit.circle: no visible global function definition for
     ‘complete.cases’
    make.circular.link : linkfun: no visible global function definition for
     ‘qnorm’
    make.circular.link : linkinv: no visible global function definition for
     ‘qnorm’
    make.circular.link : linkinv: no visible global function definition for
     ‘pnorm’
    make.circular.link : mu.eta: no visible global function definition for
     ‘dnorm’
    medianHL.default: no visible global function definition for
     ‘median.default’
    mle.cardioid: no visible global function definition for ‘na.omit’
    mle.vonmises: no visible global function definition for ‘na.omit’
    mle.vonmises.bootstrap.ci: no visible global function definition for
     ‘na.omit’
    mle.wrappedcauchy: no visible global function definition for ‘na.omit’
    mle.wrappednormal: no visible global function definition for ‘na.omit’
    modal.region.circular: no visible global function definition for
     ‘uniroot’
    plot.circular: no visible global function definition for ‘na.omit’
    plot.density.circular: no visible global function definition for
     ‘plot.default’
    plot.density.circular: no visible global function definition for
     ‘abline’
    plot.density.circular: no visible global function definition for
     ‘points’
    plot.edf: no visible global function definition for ‘na.omit’
    plot.edf: no visible global function definition for ‘plot.default’
    plot.lsfit.circle: no visible global function definition for ‘par’
    plot.lsfit.circle: no visible global function definition for
     ‘plot.default’
    plot.lsfit.circle: no visible global function definition for
     ‘lines.default’
    plot.lsfit.circle: no visible global function definition for
     ‘points.default’
    plot.lsfit.circle: no visible global function definition for
     ‘text.default’
    plot.modal.region.circular: no visible global function definition for
     ‘par’
    plot.modal.region.circular: no visible global function definition for
     ‘plot’
    plot.modal.region.circular: no visible global function definition for
     ‘abline’
    plot.modal.region.circular: no visible global function definition for
     ‘polygon’
    plot.totalvariation.circular: no visible global function definition for
     ‘par’
    plot.totalvariation.circular: no visible global function definition for
     ‘plot’
    plot.totalvariation.circular: no visible global function definition for
     ‘axTicks’
    plot.totalvariation.circular: no visible global function definition for
     ‘polygon’
    plot.totalvariation.circular: no visible global function definition for
     ‘abline’
    points.circular: no visible global function definition for ‘na.omit’
    pp.plot: no visible global function definition for ‘na.omit’
    pp.plot: no visible global function definition for ‘plot.default’
    pp.plot: no visible global function definition for ‘abline’
    print.clm: no visible global function definition for ‘coef’
    print.clm: no visible global function definition for ‘naprint’
    print.lm.circular.cl: no visible global function definition for
     ‘printCoefmat’
    print.rao.spacing.test: Error while checking: invalid ‘envir’ argument
    print.rao.test: no visible global function definition for ‘qchisq’
    print.summary.clm: no visible global function definition for ‘setNames’
    print.summary.clm: no visible global function definition for
     ‘printCoefmat’
    print.summary.clm: no visible global function definition for ‘naprint’
    print.summary.clm: no visible global function definition for ‘symnum’
    pwrappednormal : intDwrappednormalRad: no visible global function
     definition for ‘integrate’
    qvonmises : zeroPvonmisesRad: no visible global function definition for
     ‘integrate’
    qvonmises: no visible global function definition for ‘uniroot’
    qwrappednormal : zeroPwrappednormalRad: no visible global function
     definition for ‘integrate’
    qwrappednormal: no visible global function definition for ‘uniroot’
    rao.spacing.test: no visible global function definition for ‘na.omit’
    rao.test: no visible binding for global variable ‘na.omit’
    rayleigh.test: no visible global function definition for ‘na.omit’
    rose.diag: no visible global function definition for ‘na.omit’
    rose.diag.oldstyle: no visible global function definition for ‘na.omit’
    rstable: no visible global function definition for ‘rcauchy’
    rstable: no visible global function definition for ‘rnorm’
    rstable: no visible global function definition for ‘rexp’
    summary.clm: no visible global function definition for ‘coef’
    summary.clm: no visible global function definition for ‘pt’
    summary.clm: no visible global function definition for ‘residuals’
    ticks.circular: no visible global function definition for ‘par’
    totalvariation.circular: no visible global function definition for
     ‘approxfun’
    totalvariation.circular: no visible global function definition for
     ‘integrate’
    trigonometric.moment: no visible global function definition for
     ‘na.omit’
    wallraff.test.default: no visible global function definition for
     ‘complete.cases’
    wallraff.test.formula: no visible global function definition for
     ‘model.frame’
    wallraff.test.formula: no visible global function definition for
     ‘as.formula’
    watson.test: no visible global function definition for ‘na.omit’
    watson.two.test: no visible global function definition for ‘na.omit’
    watson.wheeler.test.default: no visible global function definition for
     ‘complete.cases’
    watson.wheeler.test.formula: no visible global function definition for
     ‘model.frame’
    watson.wheeler.test.formula: no visible global function definition for
     ‘as.formula’
    watson.williams.test.default: no visible global function definition for
     ‘complete.cases’
    watson.williams.test.formula: no visible global function definition for
     ‘model.frame’
    watson.williams.test.formula: no visible global function definition for
     ‘as.formula’
    weights.clm: no visible global function definition for ‘naresid’
    windrose : circles: no visible global function definition for ‘polygon’
    windrose : circles: no visible global function definition for ‘lines’
    windrose: no visible global function definition for ‘complete.cases’
    windrose: no visible global function definition for ‘par’
    windrose: no visible global function definition for ‘plot’
    windrose: no visible global function definition for ‘hist.default’
    windrose: no visible global function definition for ‘lines’
    windrose: no visible global function definition for ‘polygon’
    windrose: no visible global function definition for ‘text’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64

Version: 0.4-7
Check: R code for possible problems
Result: NOTE
    print.rao.spacing.test: no visible binding for global variable
     ‘rao.table’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.4-7
Check: foreign function calls
Result: NOTE
    Call with DUP != TRUE:
     .C("R_distance", x = as.double(x), nr = N, nc = ncol(x), d = double(N *
     (N - 1)/2), diag = as.integer(FALSE), method = as.integer(method),
     DUP = FALSE, NAOK = TRUE, PACKAGE = "circular")
    DUP = FALSE is deprecated and will be disabled in future versions of R.
Flavor: r-oldrel-windows-ix86+x86_64